Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yahf/fdra-like protein | SAMEA3472110_02093 | Not Available | Positive | 2137533 - 2139092 | 54877.8 |
| ybl186 | SAMEA3472110_02094 | Not Available | Positive | 2139038 - 2140513 | 51914.6 |
| carbamate kinase | SAMEA3472110_02095 | Not Available | Positive | 2140506 - 2141462 | 34035.9 |
| glutamyl-trna(gln) amidotransferase subunit a | SAMEA3472110_02096 | Not Available | Positive | 2141479 - 2141868 | 14311.2 |
| permease | SAMEA3472110_02097 | Not Available | Positive | 2141894 - 2143117 | 42554.3 |
| lysr family transcriptional regulator | SAMEA3472110_02098 | Not Available | Positive | 2143195 - 2144100 | 33895.2 |
| transcriptional regulator | SAMEA3472110_02099 | Not Available | Positive | 2144300 - 2145145 | 31446.8 |
| transketolase | SAMEA3472110_02100 | Not Available | Negative | 2145175 - 2147172 | 72999.8 |
| fused glucose-specific pts enzymes: iibcomponent and iic component | SAMEA3472110_02101 | Not Available | Negative | 2147223 - 2148731 | 54525.7 |
| sugar isomerase | SAMEA3472110_02102 | Not Available | Negative | 2148773 - 2149330 | 20371.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





