Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dimethyl sulfoxide reductase, oxidoreductase subunit | SAMEA3472110_02026 | Not Available | Negative | 2083799 - 2086225 | 89735.8 |
| protein | SAMEA3472110_02027 | Not Available | Negative | 2086424 - 2086729 | 10491.3 |
| lipoprotein | SAMEA3472110_02028 | Not Available | Positive | 2086801 - 2087547 | 27891.0 |
| spermidine n1-acetyltransferase | SAMEA3472110_02029 | Not Available | Negative | 2087550 - 2088110 | 21902.3 |
| protein | SAMEA3472110_02030 | Not Available | Negative | 2088145 - 2088486 | 12943.4 |
| inner membrane protein | SAMEA3472110_02031 | Not Available | Positive | 2088621 - 2088947 | 11906.2 |
| starvation sensing protein rspa | SAMEA3472110_02032 | Not Available | Positive | 2089153 - 2090367 | 45971.0 |
| uncharacterised protein | SAMEA3472110_02070 | Not Available | Negative | 2115043 - 2115810 | 28958.9 |
| protoporphyrinogen oxidase | SAMEA3472110_02071 | Not Available | Negative | 2116044 - 2116589 | 21200.4 |
| trk system potassium uptake protein trkh | SAMEA3472110_02072 | Not Available | Negative | 2116601 - 2118052 | 52962.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





