Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid shock protein | SAMEA3472110_02016 | Not Available | Negative | 2072611 - 2072919 | 10531.7 |
| major facilitator superfamily protein | SAMEA3472110_02017 | Not Available | Negative | 2073343 - 2074596 | 45290.3 |
| lysr family transcriptional regulator | SAMEA3472110_02018 | Not Available | Positive | 2074703 - 2075596 | 33263.3 |
| protein mlc (making large colonies protein) | SAMEA3472110_02019 | Not Available | Positive | 2075731 - 2076951 | 44292.7 |
| dithiobiotin synthetase | SAMEA3472110_02020 | Not Available | Positive | 2077076 - 2077771 | 24968.4 |
| voltage-gated clc-type chloride channel | SAMEA3472110_02021 | Not Available | Negative | 2077724 - 2078980 | 44294.2 |
| anaerobic dimethyl sulfoxide reductase maturation protein (twin-arginine leader-binding protein) | SAMEA3472110_02022 | Not Available | Negative | 2079174 - 2079788 | 23387.9 |
| putative dimethyl sulfoxide reductase, anchor subunit | SAMEA3472110_02023 | Not Available | Negative | 2079831 - 2080685 | 30491.5 |
| anaerobic dimethyl sulfoxide reductase subunit b | SAMEA3472110_02024 | Not Available | Negative | 2080687 - 2081304 | 22752.9 |
| putative dimethyl sulfoxide reductase, olydopterin dinucleotide binding subunit | SAMEA3472110_02025 | Not Available | Negative | 2081315 - 2083711 | 88969.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





