Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein associated with alginate biosynthesis | SAMEA3472110_02006 | Not Available | Positive | 2062265 - 2062600 | 12295.8 |
| putative short chain dehydrogenase | SAMEA3472110_02007 | Not Available | Negative | 2062597 - 2063319 | 26407.9 |
| arginine/ornithine antiporter | SAMEA3472110_02008 | Not Available | Negative | 2063356 - 2064738 | 49518.5 |
| protein ydgh | SAMEA3472110_02009 | Not Available | Negative | 2064924 - 2065868 | 33905.0 |
| nad(p) transhydrogenase subunit alpha | SAMEA3472110_02010 | Not Available | Positive | 2066392 - 2067924 | 54626.6 |
| nad(p) transhydrogenase subunit beta | SAMEA3472110_02011 | Not Available | Positive | 2067935 - 2069323 | 48726.0 |
| transporter | SAMEA3472110_02012 | Not Available | Negative | 2069348 - 2070382 | 37603.4 |
| multidrug resistance protein | SAMEA3472110_02013 | Not Available | Positive | 2070794 - 2071159 | 13115.7 |
| multidrug resistance protein | SAMEA3472110_02014 | Not Available | Positive | 2071146 - 2071475 | 11740.8 |
| putative protease | SAMEA3472110_02015 | Not Available | Negative | 2071514 - 2072335 | 29277.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





