Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein | SAMEA3472110_01945 | Not Available | Negative | 1999722 - 2001095 | 49434.2 |
| riboflavin synthase subunit alpha | SAMEA3472110_01946 | Not Available | Positive | 2001310 - 2001951 | 23446.3 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMEA3472110_01947 | Not Available | Negative | 2001991 - 2003139 | 43911.3 |
| major facilitator superfamily protein | SAMEA3472110_01948 | Not Available | Negative | 2003430 - 2004641 | 43457.9 |
| lysr family transcriptional regulator | SAMEA3472110_01949 | Not Available | Positive | 2004754 - 2005686 | 35265.9 |
| purine nucleotide synthesis repressor | SAMEA3472110_01950 | Not Available | Negative | 2005683 - 2006708 | 38177.0 |
| major facilitator superfamily protein | SAMEA3472110_01952 | Not Available | Positive | 2007262 - 2008431 | 40124.8 |
| superoxide dismutase | SAMEA3472110_01953 | Not Available | Negative | 2008577 - 2009158 | 21296.8 |
| putative exported hydrolase | SAMEA3472110_01954 | Not Available | Negative | 2009286 - 2010113 | 30389.7 |
| monothiol glutaredoxin ydhd | SAMEA3472110_01955 | Not Available | Positive | 2010448 - 2010795 | 12879.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





