Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein | SAMEA3472110_01924 | Not Available | Positive | 1980150 - 1980518 | 13286.8 |
| cysteine desulfurase activator complex subunit sufb | SAMEA3472110_01925 | Not Available | Positive | 1980527 - 1982014 | 54761.1 |
| cysteine desulfurase | SAMEA3472110_01926 | Not Available | Positive | 1982024 - 1982770 | 27573.0 |
| component of sufb-sufc-sufd cysteine desulfurase activator complex | SAMEA3472110_01927 | Not Available | Positive | 1982745 - 1984016 | 46763.4 |
| cysteine desulfurase (selenocysteine lyase) | SAMEA3472110_01928 | Not Available | Positive | 1984013 - 1985233 | 44424.3 |
| cysteine desulfuration protein | SAMEA3472110_01929 | Not Available | Positive | 1985246 - 1985662 | 15900.4 |
| putative peptidoglycan-binding protein | SAMEA3472110_01930 | Not Available | Positive | 1985811 - 1986815 | 36026.4 |
| murein lipoprotein | SAMEA3472110_01931 | Not Available | Negative | 1986879 - 1987115 | 8323.95 |
| pyruvate kinase | SAMEA3472110_01932 | Not Available | Negative | 1987426 - 1988838 | 50861.7 |
| protein | SAMEA3472110_01933 | Not Available | Positive | 1989396 - 1989605 | 7907.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





