Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative coa transferase | SAMEA3472110_01912 | Not Available | Negative | 1967351 - 1968946 | 57565.7 |
| 3-dehydroquinate dehydratase | SAMEA3472110_01913 | Not Available | Negative | 1969091 - 1969849 | 27468.2 |
| quinate/shikimate dehydrogenase | SAMEA3472110_01914 | Not Available | Negative | 1969880 - 1970746 | 31229.6 |
| major facilitator superfamily protein | SAMEA3472110_01915 | Not Available | Negative | 1970758 - 1972023 | 46078.0 |
| major facilitator superfamily protein | SAMEA3472110_01916 | Not Available | Negative | 1972250 - 1973464 | 44576.6 |
| ydil protein | SAMEA3472110_01917 | Not Available | Negative | 1973564 - 1973920 | 13961.6 |
| inner membrane protein | SAMEA3472110_01919 | Not Available | Negative | 1974349 - 1975461 | 39833.7 |
| putative fad-binding oxidase | SAMEA3472110_01920 | Not Available | Positive | 1975850 - 1978906 | 113275.0 |
| esterase | SAMEA3472110_01921 | Not Available | Positive | 1978903 - 1979313 | 14912.2 |
| protein | SAMEA3472110_01922 | Not Available | Positive | 1979413 - 1979601 | 7266.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





