Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lateral flagellar export/assembly protein (flih-like) | SAMEA3472110_01847 | Not Available | Positive | 1914778 - 1915488 | 26497.4 |
| flagellar protein export atpase | SAMEA3472110_01848 | Not Available | Positive | 1915481 - 1916818 | 47863.3 |
| lateral flagellar export/assembly protein | SAMEA3472110_01849 | Not Available | Positive | 1916821 - 1917255 | 16057.4 |
| putative glycerol-3-phosphate cytidylyltransferase | SAMEA3472110_01850 | Not Available | Positive | 1917258 - 1917662 | 14807.9 |
| putative glysosyltransferase | SAMEA3472110_01851 | Not Available | Negative | 1917807 - 1920278 | 94101.8 |
| uncharacterised protein | SAMEA3472110_01852 | Not Available | Positive | 1920309 - 1920527 | 8095.71 |
| putative lysine-n-methylase | SAMEA3472110_01853 | Not Available | Negative | 1920557 - 1921387 | 31278.7 |
| lateral flagellar chaperone protein (flgn-like) | SAMEA3472110_01854 | Not Available | Negative | 1921515 - 1921943 | 16662.9 |
| lateral flagellar anti-sigma factor 28 protein (flgm-like) | SAMEA3472110_01855 | Not Available | Negative | 1921956 - 1922231 | 9652.18 |
| type-2 restriction enzyme ecorii (r.ecorii) (type ii restriction enzyme ecorii) (endonuclease ecorii) | SAMEA3472110_01856 | Not Available | Positive | 1922404 - 1923609 | 45169.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





