Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vgr-like protein | SAMEA3472110_01817 | Not Available | Positive | 1883461 - 1885674 | 80367.6 |
| uncharacterized conserved protein | SAMEA3472110_01818 | Not Available | Positive | 1885698 - 1886141 | 16385.5 |
| rhs core protein with extension | SAMEA3472110_01819 | Not Available | Positive | 1886162 - 1890265 | 153609.0 |
| ankyrin repeat containing virulence factor | SAMEA3472110_01820 | Not Available | Positive | 1890249 - 1891349 | 41774.1 |
| uncharacterised protein | SAMEA3472110_01821 | Not Available | Positive | 1891860 - 1892246 | 14905.3 |
| uncharacterised protein | SAMEA3472110_01822 | Not Available | Positive | 1892277 - 1892711 | 16246.2 |
| protein rhsa | SAMEA3472110_01823 | Not Available | Positive | 1892947 - 1894041 | 41573.6 |
| uncharacterised protein | SAMEA3472110_01824 | Not Available | Positive | 1894198 - 1894500 | 10622.2 |
| uncharacterised protein | SAMEA3472110_01825 | Not Available | Positive | 1894517 - 1894822 | 11596.3 |
| rhs repeat family protein | SAMEA3472110_01826 | Not Available | Positive | 1894905 - 1896044 | 42461.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





