Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_01797 | Not Available | Positive | 1867413 - 1867976 | 20119.8 |
| uncharacterised protein | SAMEA3472110_01798 | Not Available | Positive | 1867979 - 1868269 | 11240.6 |
| putative type vi secretion protein | SAMEA3472110_01799 | Not Available | Positive | 1868331 - 1868876 | 19895.9 |
| putative type vi secretion protein | SAMEA3472110_01800 | Not Available | Positive | 1868901 - 1870415 | 56705.9 |
| uncharacterised protein | SAMEA3472110_01801 | Not Available | Positive | 1870468 - 1870953 | 17418.8 |
| uncharacterised protein | SAMEA3472110_01802 | Not Available | Positive | 1870950 - 1871321 | 14124.9 |
| hemolysin-coregulated protein (uncharacterized) | SAMEA3472110_01803 | Not Available | Positive | 1871433 - 1871540 | 4235.97 |
| hemolysin-coregulated protein (uncharacterized) | SAMEA3472110_01804 | Not Available | Positive | 1871550 - 1871918 | 13011.5 |
| uncharacterized protein conserved in bacteria | SAMEA3472110_01805 | Not Available | Positive | 1871986 - 1872519 | 20122.1 |
| type vi secretion protein | SAMEA3472110_01806 | Not Available | Positive | 1872523 - 1873866 | 50330.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





