Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pils domain-containing protein | SAMEA3472110_01775 | Not Available | Negative | 1846581 - 1847195 | 21244.3 |
| pilr protein | SAMEA3472110_01776 | Not Available | Negative | 1847212 - 1848297 | 40620.7 |
| type ii secretion system protein e | SAMEA3472110_01777 | Not Available | Negative | 1848310 - 1849863 | 58127.1 |
| type iv pilus biogenesis protein pilp | SAMEA3472110_01778 | Not Available | Negative | 1849874 - 1850326 | 16073.3 |
| pilo protein | SAMEA3472110_01779 | Not Available | Negative | 1850313 - 1851608 | 48077.6 |
| type ivb pilus formation outer membrane protein, r64 piln family | SAMEA3472110_01780 | Not Available | Negative | 1851601 - 1853283 | 59854.8 |
| pilm protein | SAMEA3472110_01781 | Not Available | Negative | 1853297 - 1853734 | 15746.1 |
| pill protein | SAMEA3472110_01782 | Not Available | Negative | 1853734 - 1854801 | 38610.0 |
| inci1 conjugal transfer protein pilk | SAMEA3472110_01783 | Not Available | Negative | 1855130 - 1855723 | 23366.0 |
| pili protein | SAMEA3472110_01784 | Not Available | Negative | 1855773 - 1856147 | 14550.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





