Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface exclusion protein exca | SAMEA3472110_01745 | Not Available | Negative | 1814932 - 1815594 | 25742.2 |
| tray protein | SAMEA3472110_01746 | Not Available | Negative | 1815665 - 1817833 | 77030.8 |
| conjugal transfer protein trax | SAMEA3472110_01747 | Not Available | Negative | 1817930 - 1818514 | 22639.8 |
| conjugal transfer protein traw | SAMEA3472110_01748 | Not Available | Negative | 1818543 - 1819745 | 42836.0 |
| conjugal transfer protein trav | SAMEA3472110_01749 | Not Available | Negative | 1819712 - 1820326 | 23362.2 |
| protein trau | SAMEA3472110_01750 | Not Available | Negative | 1820326 - 1823370 | 114078.0 |
| trat transfer protein | SAMEA3472110_01751 | Not Available | Negative | 1823460 - 1824260 | 30708.9 |
| tras transfer protein | SAMEA3472110_01752 | Not Available | Negative | 1824244 - 1824432 | 7004.03 |
| trar | SAMEA3472110_01753 | Not Available | Negative | 1824496 - 1824900 | 14016.0 |
| inci1 conjugal transfer protein traq | SAMEA3472110_01754 | Not Available | Negative | 1824951 - 1825478 | 18134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





