Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lexa regulated protein | SAMEA3472110_01723 | Not Available | Negative | 1787670 - 1788032 | 13873.9 |
| putative esterase/lipase | SAMEA3472110_01724 | Not Available | Negative | 1788103 - 1788867 | 28433.9 |
| negative modulator of initiation of replication | SAMEA3472110_01725 | Not Available | Positive | 1789052 - 1789597 | 20316.6 |
| phosphoglucomutase | SAMEA3472110_01726 | Not Available | Positive | 1789623 - 1791263 | 58364.2 |
| putrescine transporter | SAMEA3472110_01727 | Not Available | Negative | 1791320 - 1792639 | 46483.6 |
| ornithine decarboxylase | SAMEA3472110_01728 | Not Available | Negative | 1792636 - 1794834 | 82521.4 |
| protein of uncharacterised function (duf2618) | SAMEA3472110_01729 | Not Available | Negative | 1795145 - 1795249 | 4288.17 |
| two-component response regulator | SAMEA3472110_01730 | Not Available | Negative | 1795524 - 1796201 | 25392.7 |
| two-component sensor kinase | SAMEA3472110_01731 | Not Available | Negative | 1796198 - 1798882 | 98696.3 |
| potassium-transporting atpase subunit c | SAMEA3472110_01732 | Not Available | Negative | 1798875 - 1799447 | 20309.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





