Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine repressor | SAMEA3472110_01713 | Not Available | Negative | 1776567 - 1777787 | 44544.0 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMEA3472110_01714 | Not Available | Negative | 1777796 - 1778944 | 40979.5 |
| glucosamine-6-phosphate isomerase | SAMEA3472110_01715 | Not Available | Negative | 1779004 - 1779804 | 29775.9 |
| n-acetylglucosamine-specific pts system eiicba components | SAMEA3472110_01716 | Not Available | Positive | 1780137 - 1782083 | 68366.0 |
| glutaminyl-trna synthetase | SAMEA3472110_01717 | Not Available | Positive | 1782286 - 1783950 | 63527.3 |
| putative outer membrane porin | SAMEA3472110_01718 | Not Available | Positive | 1784399 - 1784974 | 20775.0 |
| outer membrane protein ybfm | SAMEA3472110_01719 | Not Available | Positive | 1784975 - 1785805 | 31828.6 |
| putative lipoprotein | SAMEA3472110_01720 | Not Available | Positive | 1785855 - 1786181 | 12043.4 |
| ferric uptake regulation protein | SAMEA3472110_01721 | Not Available | Negative | 1786265 - 1786711 | 16795.8 |
| flavodoxin 1 | SAMEA3472110_01722 | Not Available | Negative | 1787000 - 1787530 | 19737.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





