Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rare lipoprotein a | SAMEA3472110_01682 | Not Available | Negative | 1749564 - 1750652 | 37514.1 |
| rod shape-determining protein roda | SAMEA3472110_01683 | Not Available | Negative | 1750663 - 1751775 | 40478.6 |
| penicillin-binding protein 2 | SAMEA3472110_01684 | Not Available | Negative | 1751778 - 1753679 | 70860.6 |
| putative cytoplasmic protein ybea | SAMEA3472110_01685 | Not Available | Negative | 1753710 - 1754177 | 17342.1 |
| putative acr | SAMEA3472110_01686 | Not Available | Negative | 1754181 - 1754498 | 11582.9 |
| alpha-ribazole-5'-phosphate phosphatase | SAMEA3472110_01687 | Not Available | Negative | 1754758 - 1755369 | 23352.8 |
| nicotinic acid mononucleotide adenylyltransferase | SAMEA3472110_01688 | Not Available | Negative | 1755393 - 1756034 | 24529.3 |
| dna polymerase iii subunit delta | SAMEA3472110_01689 | Not Available | Negative | 1756036 - 1757067 | 38726.0 |
| rare lipoprotein b | SAMEA3472110_01690 | Not Available | Negative | 1757067 - 1757648 | 21356.8 |
| leucyl-trna synthetase | SAMEA3472110_01691 | Not Available | Negative | 1757663 - 1760245 | 97285.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





