Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease i | SAMEA3472110_01661 | Not Available | Negative | 1729654 - 1730460 | 29605.1 |
| citrate carrier | SAMEA3472110_01662 | Not Available | Negative | 1730574 - 1732037 | 53152.7 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | SAMEA3472110_01663 | Not Available | Negative | 1732087 - 1732965 | 31620.3 |
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | SAMEA3472110_01664 | Not Available | Negative | 1732940 - 1733491 | 20285.6 |
| citrate lyase subunit alpha | SAMEA3472110_01665 | Not Available | Negative | 1733495 - 1735027 | 55194.0 |
| citrate lyase subunit beta | SAMEA3472110_01666 | Not Available | Negative | 1735038 - 1735946 | 33120.6 |
| citrate lyase acyl carrier protein (citrate lyase gamma chain) | SAMEA3472110_01667 | Not Available | Negative | 1735943 - 1736239 | 10689.9 |
| citrate lyase synthetase | SAMEA3472110_01668 | Not Available | Negative | 1736254 - 1737312 | 40079.5 |
| sensor kinase dpib | SAMEA3472110_01669 | Not Available | Positive | 1737692 - 1739350 | 61596.6 |
| two-component response regulator | SAMEA3472110_01670 | Not Available | Positive | 1739319 - 1739999 | 25454.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





