Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | SAMEA3472110_01650 | Not Available | Positive | 1720452 - 1721612 | 42985.3 |
| parb-like nuclease | SAMEA3472110_01651 | Not Available | Negative | 1721613 - 1722242 | 23949.8 |
| immunoglobulin-binding regulator | SAMEA3472110_01652 | Not Available | Negative | 1722215 - 1723435 | 47825.2 |
| transcriptional regulator ybdo | SAMEA3472110_01653 | Not Available | Negative | 1723582 - 1724484 | 34293.7 |
| disulfide isomerase/thiol-disulfide oxidase | SAMEA3472110_01654 | Not Available | Negative | 1724692 - 1725438 | 27541.5 |
| alkyl hydroperoxide reductase subunit c | SAMEA3472110_01655 | Not Available | Positive | 1725810 - 1726373 | 20762.5 |
| alkyl hydroperoxide reductase | SAMEA3472110_01656 | Not Available | Positive | 1726514 - 1728109 | 57405.0 |
| universal stress protein uspg | SAMEA3472110_01657 | Not Available | Negative | 1728230 - 1728658 | 15994.2 |
| uncharacterised protein | SAMEA3472110_01658 | Not Available | Negative | 1728782 - 1728871 | 3274.1 |
| regulator of nucleoside diphosphate kinase | SAMEA3472110_01659 | Not Available | Negative | 1729014 - 1729424 | 14928.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





