Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper/silver efflux system outer membrane protein cusc | SAMEA3472110_01619 | Not Available | Positive | 1684197 - 1685579 | 50786.9 |
| cation efflux system protein | SAMEA3472110_01620 | Not Available | Positive | 1685603 - 1685935 | 12268.9 |
| cation efflux system protein | SAMEA3472110_01621 | Not Available | Positive | 1685951 - 1687174 | 44353.4 |
| cation efflux system protein | SAMEA3472110_01622 | Not Available | Positive | 1687186 - 1690329 | 114693.0 |
| phenylalanine transporter | SAMEA3472110_01623 | Not Available | Positive | 1690431 - 1691807 | 50614.3 |
| putative mechanosensitive ion channel protein | SAMEA3472110_01624 | Not Available | Negative | 1691888 - 1693135 | 46639.6 |
| oxygen-insensitive nad(p)h nitroreductase | SAMEA3472110_01625 | Not Available | Negative | 1693243 - 1693896 | 23878.4 |
| putative cytoplasmic protein yjbr | SAMEA3472110_01626 | Not Available | Negative | 1693975 - 1694358 | 14700.8 |
| membrane protein ybdj | SAMEA3472110_01627 | Not Available | Negative | 1694423 - 1694671 | 9403.99 |
| carboxylate-amine ligase | SAMEA3472110_01628 | Not Available | Negative | 1694737 - 1695855 | 41724.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





