Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine dehydratase | SAMEA3472110_01597 | Not Available | Positive | 1654688 - 1656052 | 48466.5 |
| transporter | SAMEA3472110_01598 | Not Available | Positive | 1656327 - 1657658 | 48329.6 |
| putative inner membrane protein | SAMEA3472110_01599 | Not Available | Positive | 1657686 - 1658996 | 45320.8 |
| phage tail assembly protein | SAMEA3472110_01600 | Not Available | Positive | 1659246 - 1659878 | 21872.6 |
| host specificity protein j | SAMEA3472110_01601 | Not Available | Positive | 1659939 - 1663334 | 124596.0 |
| outer membrane precursor lom | SAMEA3472110_01602 | Not Available | Positive | 1663402 - 1664001 | 21593.8 |
| putative tail fiber protein | SAMEA3472110_01603 | Not Available | Positive | 1664066 - 1666981 | 96150.9 |
| manganese catalase of prophage | SAMEA3472110_01605 | Not Available | Negative | 1667682 - 1668572 | 32179.9 |
| protein ycie | SAMEA3472110_01606 | Not Available | Negative | 1668591 - 1669097 | 19064.6 |
| ycif protein | SAMEA3472110_01607 | Not Available | Negative | 1669134 - 1669634 | 18473.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





