Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein | SAMEA3472110_01533 | Not Available | Positive | 1590976 - 1592919 | 71045.7 |
| dihydropteroate synthase | SAMEA3472110_01534 | Not Available | Positive | 1593009 - 1593857 | 30631.0 |
| phosphoglucosamine mutase | SAMEA3472110_01535 | Not Available | Positive | 1593850 - 1595187 | 47546.4 |
| preprotein translocase subunit secg | SAMEA3472110_01536 | Not Available | Positive | 1595415 - 1595747 | 11365.8 |
| Trna-leu | Not Available | Not Available | Positive | 1595762 - 1595848 | Not Available |
| outer-membrane protein yhbx | SAMEA3472110_01538 | Not Available | Positive | 1596415 - 1597932 | 56730.0 |
| argininosuccinate synthetase | SAMEA3472110_01539 | Not Available | Negative | 1597940 - 1599283 | 49917.3 |
| Trna-met | Not Available | Not Available | Positive | 1599631 - 1599707 | Not Available |
| ribosome maturation protein rimp | SAMEA3472110_01542 | Not Available | Positive | 1599914 - 1600366 | 16651.9 |
| transcription termination/antitermination factor nusa | SAMEA3472110_01543 | Not Available | Positive | 1600394 - 1601881 | 54888.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





