Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Prop protein | SAMEA3472110_02178 | Not Available | Positive | 2222151 - 2222687 | 20039.1 |
| Hypothetical protein | SAMEA3472110_02179 | Not Available | Positive | 2222684 - 2222962 | 10540.9 |
| putative prophage protein | SAMEA3472110_02180 | Not Available | Positive | 2223012 - 2223260 | 9969.94 |
| Phage major capsid protein | SAMEA3472110_02181 | Not Available | Positive | 2223534 - 2224679 | 42600.4 |
| Head maturation protease | SAMEA3472110_02182 | Not Available | Positive | 2224729 - 2225289 | 21100.9 |
| Portal protein | SAMEA3472110_02183 | Not Available | Positive | 2225291 - 2226505 | 45201.7 |
| Head-tail connector protein | SAMEA3472110_02184 | Not Available | Positive | 2226498 - 2226797 | 11262.5 |
| Putative class i holin | SAMEA3472110_02185 | Not Available | Positive | 2226797 - 2227237 | 17135.3 |
| Terminase gp2 | SAMEA3472110_02186 | Not Available | Positive | 2227993 - 2229471 | 55086.6 |
| putative prophage protein | SAMEA3472110_02187 | Not Available | Positive | 2229468 - 2229758 | 11447.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





