Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | SAMEA3472110_01512 | Not Available | Negative | 1575225 - 1575791 | 19998.3 |
| d-arabinose 5-phosphate isomerase | SAMEA3472110_01513 | Not Available | Negative | 1575812 - 1576798 | 35253.4 |
| calcium/sodium:proton antiporter | SAMEA3472110_01514 | Not Available | Negative | 1576812 - 1577789 | 34756.9 |
| abc transporter atp-binding protein | SAMEA3472110_01515 | Not Available | Positive | 1577999 - 1578808 | 29098.6 |
| putative organic solvent tolerance protein | SAMEA3472110_01516 | Not Available | Positive | 1578816 - 1579598 | 27865.0 |
| phospholipid abc transporter substrate-binding protein | SAMEA3472110_01517 | Not Available | Positive | 1579603 - 1580154 | 19577.3 |
| putative organic solvent tolerance protein | SAMEA3472110_01518 | Not Available | Positive | 1580173 - 1580808 | 23992.0 |
| putative anti-sigma factor antagonist | SAMEA3472110_01519 | Not Available | Positive | 1580808 - 1581101 | 10681.0 |
| bola family transcriptional regulator | SAMEA3472110_01520 | Not Available | Positive | 1581246 - 1581515 | 10038.0 |
| udp-n-acetylglucosamine l-carboxyvinyltransferase | SAMEA3472110_01521 | Not Available | Positive | 1581570 - 1582829 | 44820.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





