Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid transporter | SAMEA3472110_01491 | Not Available | Positive | 1552517 - 1554007 | 53653.5 |
| n-acetylmannosamine-6-phosphate 2-epimerase | SAMEA3472110_01492 | Not Available | Positive | 1554055 - 1554744 | 24075.0 |
| putative transcriptional regulator | SAMEA3472110_01493 | Not Available | Positive | 1554741 - 1555616 | 29704.8 |
| beta-galactosidase | SAMEA3472110_01494 | Not Available | Positive | 1555613 - 1556077 | 17052.8 |
| protein | SAMEA3472110_01495 | Not Available | Negative | 1556137 - 1557264 | 43544.3 |
| glutamate synthase (nadph) small subunit | SAMEA3472110_01496 | Not Available | Negative | 1557448 - 1558866 | 52032.3 |
| glutamate synthase subunit alpha | SAMEA3472110_01497 | Not Available | Negative | 1558879 - 1563432 | 166733.0 |
| putative radical sam protein | SAMEA3472110_01498 | Not Available | Positive | 1564014 - 1564943 | 34609.6 |
| aerobic respiration control protein (bifunctional two-component sensor kinase/response regulator) | SAMEA3472110_01499 | Not Available | Positive | 1565039 - 1567375 | 87988.0 |
| isoprenoid biosynthesis protein with amidotransferase-like domain | SAMEA3472110_01501 | Not Available | Positive | 1567605 - 1568258 | 22968.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





