Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine endoprotease | SAMEA3472110_01481 | Not Available | Negative | 1542981 - 1544348 | 47207.9 |
| cytochrome d ubiquinol oxidase subunit iii | SAMEA3472110_01482 | Not Available | Negative | 1544502 - 1544900 | 14961.7 |
| putative atp/gtp-binding protein | SAMEA3472110_01483 | Not Available | Positive | 1545094 - 1546221 | 43073.9 |
| 50s ribosomal protein l13 | SAMEA3472110_01484 | Not Available | Positive | 1546440 - 1546868 | 16019.5 |
| 30s ribosomal protein s9 | SAMEA3472110_01485 | Not Available | Positive | 1546884 - 1547276 | 14857.1 |
| stringent starvation protein a | SAMEA3472110_01486 | Not Available | Positive | 1547671 - 1548309 | 24306.3 |
| stringent starvation protein b | SAMEA3472110_01487 | Not Available | Positive | 1548315 - 1548812 | 18233.4 |
| c4-dicarboxylate transporter | SAMEA3472110_01488 | Not Available | Negative | 1548856 - 1550223 | 48803.9 |
| gntr family transcriptional regulator | SAMEA3472110_01489 | Not Available | Positive | 1550602 - 1551393 | 29481.9 |
| n-acetylneuraminate lyase | SAMEA3472110_01490 | Not Available | Positive | 1551515 - 1552408 | 32595.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





