Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tldd protein | SAMEA3472110_01471 | Not Available | Positive | 1533069 - 1534514 | 51367.2 |
| lysr family transcriptional regulator | SAMEA3472110_01472 | Not Available | Negative | 1534642 - 1535571 | 34518.1 |
| protein aaex | SAMEA3472110_01473 | Not Available | Positive | 1535754 - 1535957 | 7847.01 |
| p-hydroxybenzoic acid efflux pump subunit a | SAMEA3472110_01474 | Not Available | Positive | 1535965 - 1536897 | 34748.5 |
| p-hydroxybenzoic acid efflux pump subunit b | SAMEA3472110_01475 | Not Available | Positive | 1536903 - 1538870 | 73610.9 |
| barnase inhibitor | SAMEA3472110_01476 | Not Available | Positive | 1538962 - 1539234 | 10766.7 |
| protein ycfr | SAMEA3472110_01477 | Not Available | Negative | 1539290 - 1539553 | 9196.89 |
| arginine repressor | SAMEA3472110_01478 | Not Available | Negative | 1539918 - 1540388 | 16995.5 |
| malate dehydrogenase | SAMEA3472110_01479 | Not Available | Positive | 1540823 - 1541761 | 32339.2 |
| protease | SAMEA3472110_01480 | Not Available | Negative | 1541824 - 1542891 | 37583.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





