Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase | SAMEA3472110_01461 | Not Available | Negative | 1518105 - 1519454 | 49323.7 |
| biotin carboxyl carrier protein of acetyl-coa carboxylase | SAMEA3472110_01462 | Not Available | Negative | 1519465 - 1519935 | 16688.2 |
| putative zinc-binding dehydrogenase | SAMEA3472110_01463 | Not Available | Negative | 1520913 - 1521887 | 34683.9 |
| putative signal transduction protein | SAMEA3472110_01464 | Not Available | Positive | 1522039 - 1523979 | 73419.8 |
| rod shape-determining protein mreb | SAMEA3472110_01465 | Not Available | Positive | 1524284 - 1525327 | 36954.7 |
| rod shape-determining protein | SAMEA3472110_01466 | Not Available | Positive | 1525393 - 1526496 | 39532.8 |
| rod shape-determining protein | SAMEA3472110_01467 | Not Available | Positive | 1526496 - 1526984 | 18788.9 |
| maf-like protein | SAMEA3472110_01468 | Not Available | Positive | 1526993 - 1527586 | 21444.6 |
| ribonuclease g | SAMEA3472110_01469 | Not Available | Positive | 1527576 - 1529045 | 55367.4 |
| membrane protein | SAMEA3472110_01470 | Not Available | Positive | 1529113 - 1532913 | 138941.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





