Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter, permease protein | SAMEA3472110_01429 | Not Available | Positive | 1487151 - 1487984 | 30363.8 |
| nickel abc transporter, atp-binding protein | SAMEA3472110_01430 | Not Available | Positive | 1487984 - 1488748 | 26814.2 |
| nickel abc transporter, atp-binding protein | SAMEA3472110_01431 | Not Available | Positive | 1488745 - 1489551 | 29771.5 |
| nickel responsive regulator | SAMEA3472110_01432 | Not Available | Positive | 1489557 - 1489958 | 15094.7 |
| hicb family protein | SAMEA3472110_01433 | Not Available | Negative | 1490078 - 1490437 | 13403.0 |
| hica-like protein | SAMEA3472110_01434 | Not Available | Negative | 1490434 - 1490709 | 10186.4 |
| putative transporter subunit: membrane component of abc superfamily | SAMEA3472110_01435 | Not Available | Negative | 1490782 - 1491906 | 41050.2 |
| putative type i secretion system, atp-binding protein | SAMEA3472110_01436 | Not Available | Negative | 1491906 - 1494641 | 100807.0 |
| putative type i secretion system, inner membrane protein | SAMEA3472110_01437 | Not Available | Negative | 1494638 - 1495705 | 38830.6 |
| protein | SAMEA3472110_01438 | Not Available | Negative | 1496071 - 1497693 | 61254.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





