Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ditp- and xtp- hydrolase | SAMEA3472110_01388 | Not Available | Positive | 1448927 - 1449520 | 21491.9 |
| low-affinity gluconate transporter | SAMEA3472110_01389 | Not Available | Negative | 1449577 - 1450917 | 46418.9 |
| gluconate kinase | SAMEA3472110_01390 | Not Available | Negative | 1450921 - 1451448 | 19491.3 |
| gluconate utilization system gnt-i transcriptional repressor | SAMEA3472110_01391 | Not Available | Negative | 1451587 - 1452582 | 36424.3 |
| pirin-related protein | SAMEA3472110_01392 | Not Available | Negative | 1452806 - 1453501 | 26280.8 |
| putative oxidoreductase | SAMEA3472110_01393 | Not Available | Negative | 1453624 - 1454661 | 38744.0 |
| n-acetyltransferase gcn5 | SAMEA3472110_01395 | Not Available | Positive | 1454995 - 1455483 | 18790.7 |
| gamma-glutamyltranspeptidase | SAMEA3472110_01396 | Not Available | Negative | 1455542 - 1457284 | 61770.4 |
| conserved protein, duf2756 family | SAMEA3472110_01397 | Not Available | Positive | 1457403 - 1457843 | 16624.9 |
| glycerophosphoryl diester phosphodiesterase | SAMEA3472110_01398 | Not Available | Negative | 1457830 - 1458573 | 27351.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





