Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fimbrial minor structural subunit | SAMEA3472110_01378 | Not Available | Negative | 1432732 - 1433295 | 20222.9 |
| fimbrial outer membrane usher protein | SAMEA3472110_01379 | Not Available | Negative | 1433295 - 1435886 | 95675.6 |
| putative fimbria chaperone protein | SAMEA3472110_01380 | Not Available | Negative | 1435928 - 1436680 | 27854.7 |
| fimbrial protein | SAMEA3472110_01381 | Not Available | Negative | 1436801 - 1437505 | 24082.8 |
| glycogen phosphorylase | SAMEA3472110_01382 | Not Available | Negative | 1437991 - 1440438 | 93088.6 |
| glycogen synthase | SAMEA3472110_01383 | Not Available | Negative | 1440457 - 1441890 | 52825.4 |
| glucose-1-phosphate adenylyltransferase | SAMEA3472110_01384 | Not Available | Negative | 1441890 - 1443185 | 48700.4 |
| glycogen debranching protein | SAMEA3472110_01385 | Not Available | Negative | 1443203 - 1445176 | 73608.6 |
| 1,4-alpha-glucan-branching protein | SAMEA3472110_01386 | Not Available | Negative | 1445173 - 1447359 | 84359.5 |
| aspartate-semialdehyde dehydrogenase | SAMEA3472110_01387 | Not Available | Negative | 1447632 - 1448735 | 40020.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





