Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator | SAMEA3472110_01358 | Not Available | Positive | 1408858 - 1409094 | 8688.72 |
| putative transposase | SAMEA3472110_01359 | Not Available | Positive | 1409297 - 1410190 | 33957.1 |
| uncharacterised protein | SAMEA3472110_01360 | Not Available | Positive | 1410208 - 1410306 | 3829.72 |
| carboxylesterase (biotin synthesis protein bioh) | SAMEA3472110_01361 | Not Available | Negative | 1410410 - 1411180 | 28605.8 |
| gluconate periplasmic binding protein | SAMEA3472110_01362 | Not Available | Positive | 1411218 - 1411901 | 25776.9 |
| putative thioredoxin-like protein | SAMEA3472110_01363 | Not Available | Positive | 1411960 - 1412535 | 20998.9 |
| gluconate transporter, high-affinity gnt i system | SAMEA3472110_01364 | Not Available | Positive | 1412896 - 1414212 | 46001.7 |
| 4-alpha-glucanotransferase | SAMEA3472110_01365 | Not Available | Negative | 1414260 - 1416341 | 78403.5 |
| maltodextrin phosphorylase | SAMEA3472110_01366 | Not Available | Negative | 1416351 - 1418744 | 90544.5 |
| regulatory protein | SAMEA3472110_01367 | Not Available | Positive | 1419367 - 1422072 | 103035.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





