Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloenzyme superfamily protein | SAMEA3472110_01328 | Not Available | Negative | 1374860 - 1376086 | 44463.1 |
| alanine racemase like protein | SAMEA3472110_01329 | Not Available | Negative | 1376087 - 1377250 | 42349.9 |
| prd domain protein,/aha_3910 family | SAMEA3472110_01330 | Not Available | Negative | 1377334 - 1377696 | 13531.5 |
| amino acid transporter | SAMEA3472110_01331 | Not Available | Negative | 1377713 - 1378618 | 33528.4 |
| tryptophanyl-trna synthetase | SAMEA3472110_01332 | Not Available | Negative | 1378778 - 1379782 | 37425.9 |
| phosphoglycolate phosphatase | SAMEA3472110_01333 | Not Available | Negative | 1379775 - 1380533 | 27405.8 |
| ribulose-phosphate 3-epimerase | SAMEA3472110_01334 | Not Available | Negative | 1380526 - 1381203 | 24555.7 |
| dna adenine methylase | SAMEA3472110_01335 | Not Available | Negative | 1381221 - 1382057 | 32087.2 |
| damx protein | SAMEA3472110_01336 | Not Available | Negative | 1382164 - 1383450 | 46150.3 |
| 3-dehydroquinate synthase | SAMEA3472110_01337 | Not Available | Negative | 1383542 - 1384630 | 38856.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





