Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative enolase | SAMEA3472110_01308 | Not Available | Positive | 1355705 - 1355923 | 8470.04 |
| putative phosphoribulokinase | SAMEA3472110_01309 | Not Available | Positive | 1355977 - 1356846 | 32359.9 |
| osmc family protein | SAMEA3472110_01310 | Not Available | Negative | 1356901 - 1357305 | 14517.6 |
| cyclic amp receptor protein | SAMEA3472110_01311 | Not Available | Positive | 1357607 - 1358239 | 23641.9 |
| inner membrane protein | SAMEA3472110_01312 | Not Available | Positive | 1358290 - 1360380 | 79493.6 |
| bifunctional n-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein | SAMEA3472110_01313 | Not Available | Negative | 1360447 - 1361667 | 43826.6 |
| para-aminobenzoate synthase glutamine amidotransferase component i | SAMEA3472110_01314 | Not Available | Negative | 1361753 - 1362316 | 20734.0 |
| cell filamentation protein | SAMEA3472110_01315 | Not Available | Negative | 1362348 - 1362950 | 22947.3 |
| protein | SAMEA3472110_01316 | Not Available | Negative | 1362940 - 1363107 | 6668.12 |
| peptidyl-prolyl cis-trans isomerase | SAMEA3472110_01317 | Not Available | Negative | 1363212 - 1363784 | 20432.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





