Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine synthesizin protein d (sulfurtransferase) | SAMEA3472110_01298 | Not Available | Negative | 1346819 - 1347205 | 13615.0 |
| putative dna-binding transcriptional regulator | SAMEA3472110_01299 | Not Available | Negative | 1347205 - 1347927 | 26822.1 |
| fkbp-type peptidyl-prolyl isomerase | SAMEA3472110_01300 | Not Available | Negative | 1348094 - 1348906 | 28913.4 |
| protein slyx | SAMEA3472110_01301 | Not Available | Positive | 1349127 - 1349345 | 8214.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMEA3472110_01302 | Not Available | Negative | 1349394 - 1349984 | 20854.1 |
| protein | SAMEA3472110_01303 | Not Available | Negative | 1350079 - 1350279 | 7599.17 |
| glutathione-regulated potassium-efflux system protein (k(+)/h(+)antiporter) | SAMEA3472110_01304 | Not Available | Negative | 1350289 - 1352094 | 66431.4 |
| glutathione-regulated potassium-efflux system ancillary protein | SAMEA3472110_01305 | Not Available | Negative | 1352094 - 1352645 | 20817.9 |
| abc transporter atp-binding protein | SAMEA3472110_01306 | Not Available | Positive | 1352776 - 1354689 | 71847.6 |
| putative hydrolase | SAMEA3472110_01307 | Not Available | Positive | 1354689 - 1355711 | 38442.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





