Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | SAMEA3472110_01199 | Not Available | Negative | 1262530 - 1264782 | 85028.0 |
| Trna-met | Not Available | Not Available | Positive | 1265342 - 1265417 | Not Available |
| uncharacterised protein | SAMEA3472110_01201 | Not Available | Positive | 1266174 - 1267628 | 54992.9 |
| abc transporter atp-binding protein | SAMEA3472110_01202 | Not Available | Positive | 1268564 - 1273138 | 157634.0 |
| translation inhibitor protein raia | SAMEA3472110_01292 | Not Available | Negative | 1341735 - 1342076 | 12785.3 |
| translation elongation factor g | SAMEA3472110_01293 | Not Available | Negative | 1342887 - 1345001 | 77643.8 |
| 30s ribosomal protein s7 | SAMEA3472110_01294 | Not Available | Negative | 1345098 - 1345568 | 17605.4 |
| 30s ribosomal protein s12 | SAMEA3472110_01295 | Not Available | Negative | 1345665 - 1346039 | 13737.9 |
| trna 2-thiouridine synthesizing protein b | SAMEA3472110_01296 | Not Available | Negative | 1346165 - 1346452 | 10692.9 |
| trna 2-thiouridine synthesizing protein c | SAMEA3472110_01297 | Not Available | Negative | 1346460 - 1346819 | 13045.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





