Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein with hydrolase activity | SAMEA3472110_01189 | Not Available | Negative | 1253134 - 1253658 | 18658.9 |
| arsr family transcriptional regulator | SAMEA3472110_01190 | Not Available | Negative | 1253668 - 1253967 | 10596.9 |
| membrane protein | SAMEA3472110_01191 | Not Available | Positive | 1254150 - 1254308 | 5865.57 |
| putative peptidoglycan-binding protein | SAMEA3472110_01192 | Not Available | Positive | 1254392 - 1254838 | 15904.8 |
| gntr family transcriptional regulator | SAMEA3472110_01193 | Not Available | Negative | 1254845 - 1255504 | 24994.3 |
| gamma-aminobutyrate transporter | SAMEA3472110_01194 | Not Available | Negative | 1255525 - 1256925 | 51083.1 |
| 4-aminobutyrate aminotransferase | SAMEA3472110_01195 | Not Available | Negative | 1257163 - 1258443 | 45651.2 |
| succinate-semialdehyde dehydrogenase | SAMEA3472110_01196 | Not Available | Negative | 1258457 - 1259905 | 51778.1 |
| hydroxyglutarate oxidase | SAMEA3472110_01197 | Not Available | Negative | 1259928 - 1261196 | 46127.7 |
| protein csid | SAMEA3472110_01198 | Not Available | Negative | 1261216 - 1262193 | 37324.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





