Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic or exported protein | SAMEA3472110_01136 | Not Available | Positive | 1206446 - 1207219 | 28992.7 |
| translation-dependent mrna interferase, toxin of the higb-higa toxin-antitoxin system | SAMEA3472110_01137 | Not Available | Positive | 1207381 - 1207692 | 12467.8 |
| hth-type transcriptional regulator ygjm | SAMEA3472110_01138 | Not Available | Positive | 1207689 - 1208108 | 15390.2 |
| 6-phospho-beta-glucosidase | SAMEA3472110_01139 | Not Available | Negative | 1208187 - 1209611 | 53879.7 |
| arbutin-, cellobiose-, and salicin-specific pts system eiibc component | SAMEA3472110_01140 | Not Available | Negative | 1209620 - 1211077 | 51004.0 |
| transcriptional regulator | SAMEA3472110_01141 | Not Available | Positive | 1211334 - 1212347 | 36907.5 |
| electron transport protein hydn | SAMEA3472110_01142 | Not Available | Positive | 1212496 - 1213023 | 19027.2 |
| hydrogenase maturation protein hypf | SAMEA3472110_01143 | Not Available | Positive | 1213176 - 1215416 | 81449.0 |
| nitric oxide reductase flrd-nad(+) reductase | SAMEA3472110_01144 | Not Available | Negative | 1215494 - 1216627 | 41439.2 |
| anaerobic nitric oxide reductase flavorubredoxin | SAMEA3472110_01145 | Not Available | Negative | 1216624 - 1218063 | 54224.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





