Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase nickel incorporation protein | SAMEA3472110_01126 | Not Available | Negative | 1197997 - 1198347 | 13168.9 |
| formate hydrogenlyase regulatory protein | SAMEA3472110_01127 | Not Available | Positive | 1198559 - 1199020 | 17627.9 |
| formate hydrogenlyase subunit 2 | SAMEA3472110_01128 | Not Available | Positive | 1199145 - 1199756 | 21874.4 |
| formate hydrogenlyase subunit 3 | SAMEA3472110_01129 | Not Available | Positive | 1199753 - 1201579 | 64127.2 |
| formate hydrogenlyase subunit 4 | SAMEA3472110_01130 | Not Available | Positive | 1201582 - 1202505 | 33075.5 |
| formate hydrogenlyase subunit e | SAMEA3472110_01131 | Not Available | Positive | 1202523 - 1204232 | 64984.1 |
| formate hydrogenlyase subunit 6 | SAMEA3472110_01132 | Not Available | Positive | 1204242 - 1204784 | 20329.4 |
| formate hydrogenlyase subunit 7 | SAMEA3472110_01133 | Not Available | Positive | 1204784 - 1205551 | 28015.7 |
| formate hydrogenlyase maturation protein | SAMEA3472110_01134 | Not Available | Positive | 1205548 - 1205958 | 15465.6 |
| hydrogenase 3 maturation protease | SAMEA3472110_01135 | Not Available | Positive | 1205951 - 1206421 | 17080.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





