Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator | SAMEA3472110_01106 | Not Available | Negative | 1179202 - 1179609 | 15497.9 |
| 4-hydroxybenzoate decarboxylase subunit b | SAMEA3472110_01107 | Not Available | Positive | 1179756 - 1180349 | 21500.2 |
| 4-hydroxybenzoate decarboxylase subunit c | SAMEA3472110_01108 | Not Available | Positive | 1180349 - 1181776 | 52411.9 |
| 4-hydroxybenzoate decarboxylase subunit d | SAMEA3472110_01109 | Not Available | Positive | 1181787 - 1182023 | 9180.06 |
| inner membrane permease ygbn | SAMEA3472110_01110 | Not Available | Negative | 1182062 - 1183426 | 46816.7 |
| hydroxypyruvate isomerase | SAMEA3472110_01111 | Not Available | Negative | 1183515 - 1184291 | 29219.5 |
| aldolase | SAMEA3472110_01112 | Not Available | Negative | 1184296 - 1184934 | 23237.8 |
| paral putative trna synthase | SAMEA3472110_01113 | Not Available | Negative | 1184931 - 1186193 | 44898.6 |
| oxidoreductase ygbj | SAMEA3472110_01114 | Not Available | Negative | 1186190 - 1187098 | 30693.0 |
| deor family transcriptional regulator | SAMEA3472110_01115 | Not Available | Positive | 1187294 - 1188061 | 27408.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





