Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-c motif domain-containing protein | SAMEA3472110_01010 | Not Available | Positive | 1085412 - 1085870 | 17001.3 |
| formyltetrahydrofolate deformylase | SAMEA3472110_01011 | Not Available | Positive | 1085920 - 1086762 | 31922.6 |
| Trna-tyr | Not Available | Not Available | Positive | 1086922 - 1087006 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1087042 - 1087126 | Not Available |
| respiratory nitrate reductase 1 subunit gamma | SAMEA3472110_01017 | Not Available | Negative | 1087846 - 1088523 | 25484.9 |
| respiratory nitrate reductase 1 subunit delta | SAMEA3472110_01018 | Not Available | Negative | 1088523 - 1089233 | 26425.3 |
| respiratory nitrate reductase 1 subunit beta | SAMEA3472110_01019 | Not Available | Negative | 1089230 - 1090768 | 58083.6 |
| respiratory nitrate reductase 1 subunit alpha | SAMEA3472110_01020 | Not Available | Negative | 1090765 - 1094508 | 140648.0 |
| uncharacterised protein | SAMEA3472110_01021 | Not Available | Positive | 1094770 - 1094913 | 5543.0 |
| nitrite extrusion protein 1 | SAMEA3472110_01022 | Not Available | Negative | 1094903 - 1096294 | 49668.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





