Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component ii | SAMEA3472110_00980 | Not Available | Positive | 1055357 - 1056952 | 56903.4 |
| tryptophan biosynthesis protein | SAMEA3472110_00981 | Not Available | Positive | 1056956 - 1058314 | 49384.9 |
| tryptophan synthase | SAMEA3472110_00982 | Not Available | Positive | 1058326 - 1059519 | 42982.6 |
| tryptophan synthase alpha chain | SAMEA3472110_00983 | Not Available | Positive | 1059519 - 1060325 | 28719.8 |
| protein | SAMEA3472110_00984 | Not Available | Positive | 1060706 - 1060885 | 6002.69 |
| ycif protein | SAMEA3472110_00985 | Not Available | Positive | 1060971 - 1061471 | 18598.2 |
| protein ycie | SAMEA3472110_00986 | Not Available | Positive | 1061517 - 1062023 | 18997.6 |
| outer membrane protein w | SAMEA3472110_00987 | Not Available | Negative | 1062083 - 1062721 | 22929.1 |
| membrane protein ycic | SAMEA3472110_00988 | Not Available | Positive | 1063078 - 1063821 | 26420.6 |
| putative intracellular septation protein | SAMEA3472110_00989 | Not Available | Positive | 1063851 - 1064390 | 20791.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





