Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor | SAMEA3472110_00948 | Not Available | Negative | 1023131 - 1023697 | 21828.5 |
| enoyl-(acyl carrier protein) reductase | SAMEA3472110_00949 | Not Available | Positive | 1024175 - 1024963 | 27879.6 |
| oxidoreductase | SAMEA3472110_00950 | Not Available | Positive | 1025107 - 1026234 | 42240.3 |
| exoribonuclease ii | SAMEA3472110_00951 | Not Available | Positive | 1026302 - 1028236 | 72466.7 |
| putative signal transduction protein | SAMEA3472110_00952 | Not Available | Positive | 1028471 - 1030456 | 74745.3 |
| uncharacterised protein | SAMEA3472110_00953 | Not Available | Positive | 1030604 - 1030777 | 6441.71 |
| deor-family transcriptional regulator | SAMEA3472110_00954 | Not Available | Positive | 1030867 - 1031616 | 27590.2 |
| osmotically inducible lipoprotein b | SAMEA3472110_00955 | Not Available | Positive | 1031885 - 1032103 | 6948.51 |
| translation initiation factor sui1 | SAMEA3472110_00956 | Not Available | Negative | 1032229 - 1032555 | 11396.9 |
| orotidine 5'-phosphate decarboxylase | SAMEA3472110_00957 | Not Available | Negative | 1032555 - 1033352 | 28414.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





