Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3472110_00938 | Not Available | Positive | 1010316 - 1010561 | 9307.77 |
| peptide abc transporter, substrate-binding protein | SAMEA3472110_00939 | Not Available | Positive | 1010874 - 1012517 | 61453.0 |
| peptide abc transporter permease | SAMEA3472110_00940 | Not Available | Positive | 1012514 - 1013479 | 36026.1 |
| peptide abc transporter permease | SAMEA3472110_00941 | Not Available | Positive | 1013466 - 1014356 | 31622.1 |
| peptide abc transporter atp-binding protein | SAMEA3472110_00942 | Not Available | Positive | 1014356 - 1015348 | 37662.9 |
| peptide abc transporter atp-binding protein | SAMEA3472110_00943 | Not Available | Positive | 1015350 - 1016156 | 30571.5 |
| drug transport transmembrane protein | SAMEA3472110_00944 | Not Available | Negative | 1016205 - 1017368 | 41380.1 |
| outer membrane efflux lipoprotein | SAMEA3472110_00945 | Not Available | Negative | 1017377 - 1018750 | 49152.1 |
| multidrug efflux protein | SAMEA3472110_00946 | Not Available | Negative | 1018754 - 1021861 | 111688.0 |
| acriflavine resistance protein a precursor | SAMEA3472110_00947 | Not Available | Negative | 1021861 - 1022982 | 39699.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





