Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein b | SAMEA3472110_00928 | Not Available | Negative | 999084 - 999308 | 8763.59 |
| phage shock protein a | SAMEA3472110_00929 | Not Available | Negative | 999362 - 1000030 | 25521.4 |
| phage shock protein operon transcriptional activator | SAMEA3472110_00930 | Not Available | Positive | 1000197 - 1001174 | 36962.6 |
| 4-aminobutyrate aminotransferase | SAMEA3472110_00931 | Not Available | Negative | 1001294 - 1002559 | 44689.5 |
| gamma-glutamylputrescine oxidoreductase | SAMEA3472110_00932 | Not Available | Negative | 1002597 - 1003877 | 47144.2 |
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | SAMEA3472110_00933 | Not Available | Negative | 1003879 - 1005366 | 53344.4 |
| transcriptional regulator of the polyamine metabolism genes | SAMEA3472110_00934 | Not Available | Negative | 1005516 - 1006073 | 20092.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | SAMEA3472110_00935 | Not Available | Negative | 1006100 - 1006864 | 27999.7 |
| glutamine synthetase | SAMEA3472110_00936 | Not Available | Positive | 1007076 - 1008494 | 53180.2 |
| putrescine importer | SAMEA3472110_00937 | Not Available | Positive | 1008797 - 1010182 | 50832.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





