Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase e | SAMEA3472110_00907 | Not Available | Positive | 973873 - 974562 | 24571.7 |
| putative transporter | SAMEA3472110_00908 | Not Available | Negative | 974652 - 976283 | 59470.7 |
| b12-dependent methionine synthase | SAMEA3472110_00909 | Not Available | Negative | 976503 - 980186 | 135979.0 |
| iclr family transcriptional regulator | SAMEA3472110_00910 | Not Available | Positive | 980386 - 981210 | 29741.1 |
| putative type iii effector protein (ankyrin repeat protein a) | SAMEA3472110_00911 | Not Available | Positive | 981528 - 983714 | 82549.8 |
| isocitrate dehydrogenase kinase/phosphatase | SAMEA3472110_00912 | Not Available | Negative | 983683 - 985419 | 67604.2 |
| isocitrate lyase | SAMEA3472110_00913 | Not Available | Negative | 985468 - 986772 | 47524.1 |
| malate synthase | SAMEA3472110_00914 | Not Available | Negative | 986802 - 988403 | 60265.9 |
| homoserine o-succinyltransferase | SAMEA3472110_00915 | Not Available | Negative | 988672 - 989601 | 35759.2 |
| putative acetyltransferase | SAMEA3472110_00916 | Not Available | Positive | 989758 - 990201 | 16639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





