Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | SAMEA3472110_00855 | Not Available | Negative | 921546 - 923132 | 60655.6 |
| inner membrane protein | SAMEA3472110_00856 | Not Available | Positive | 923562 - 923843 | 10304.0 |
| single-strand binding protein | SAMEA3472110_00857 | Not Available | Negative | 923942 - 924478 | 18976.1 |
| excision nuclease subunit a | SAMEA3472110_00858 | Not Available | Positive | 924732 - 927554 | 103830.0 |
| putative cytoplasmic protein yjbr | SAMEA3472110_00859 | Not Available | Negative | 927589 - 927945 | 13520.2 |
| thiamin phosphate synthase | SAMEA3472110_00860 | Not Available | Negative | 927949 - 928365 | 15656.8 |
| acid phosphatase/phosphotransferase | SAMEA3472110_00861 | Not Available | Negative | 928476 - 929189 | 26104.9 |
| uncharacterised protein | SAMEA3472110_00862 | Not Available | Positive | 929590 - 930093 | 19384.1 |
| aromatic amino acid aminotransferase | SAMEA3472110_00863 | Not Available | Negative | 930315 - 931508 | 43570.2 |
| nadr-like protein | SAMEA3472110_00864 | Not Available | Negative | 931590 - 932594 | 38297.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





