Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonates transport atp-binding protein | SAMEA3472110_00823 | Not Available | Positive | 887128 - 887886 | 27818.6 |
| phosphonates transport atp-binding protein phnl | SAMEA3472110_00824 | Not Available | Positive | 887997 - 888677 | 24831.1 |
| putative amidohydrolase | SAMEA3472110_00825 | Not Available | Positive | 888674 - 889810 | 42078.9 |
| ribose 1,5-bisphosphokinase | SAMEA3472110_00826 | Not Available | Positive | 889810 - 890367 | 20757.8 |
| putative acetyltransferase | SAMEA3472110_00827 | Not Available | Positive | 890354 - 890788 | 16570.8 |
| carbon-phosphorus lyase complex accessory protein (metallo-beta-lactamase superfamily protein) | SAMEA3472110_00828 | Not Available | Positive | 890790 - 891548 | 27982.5 |
| membrane protein | SAMEA3472110_00829 | Not Available | Negative | 891576 - 891905 | 13450.3 |
| putative sugar-phosphate isomerase | SAMEA3472110_00830 | Not Available | Negative | 891974 - 892291 | 11645.9 |
| metallo-beta-lactamase superfamily protein | SAMEA3472110_00831 | Not Available | Positive | 892544 - 894529 | 73170.9 |
| formate dehydrogenase h | SAMEA3472110_00832 | Not Available | Positive | 894738 - 895013 | 10294.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





