Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylphosphonate uptake protein in phosphonate metabolism | SAMEA3472110_00813 | Not Available | Positive | 879709 - 880044 | 12345.7 |
| phnb protein | SAMEA3472110_00814 | Not Available | Positive | 880204 - 880647 | 16147.1 |
| phosphonate abc transporter atpase | SAMEA3472110_00815 | Not Available | Positive | 880780 - 881568 | 29457.4 |
| phosphonate abc transporter, substrate-binding protein | SAMEA3472110_00816 | Not Available | Positive | 881593 - 882609 | 37372.6 |
| phosphonates transport system, permease protein | SAMEA3472110_00817 | Not Available | Positive | 882670 - 883449 | 28399.3 |
| phosphonate metabolism transcriptional regulator phnf | SAMEA3472110_00818 | Not Available | Positive | 883470 - 884195 | 27604.0 |
| phosphonate metabolism protein | SAMEA3472110_00819 | Not Available | Positive | 884196 - 884648 | 16566.8 |
| phosphonate metabolism protein | SAMEA3472110_00820 | Not Available | Positive | 884645 - 885229 | 20985.5 |
| carbon-phosphorus lyase complex subunit phni | SAMEA3472110_00821 | Not Available | Positive | 885229 - 886293 | 38884.1 |
| phnj protein | SAMEA3472110_00822 | Not Available | Positive | 886286 - 887131 | 31832.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





