Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| melibiose operon regulatory protein | SAMEA3472110_00802 | Not Available | Positive | 864811 - 865719 | 34957.0 |
| biodegradative arginine decarboxylase | SAMEA3472110_00803 | Not Available | Positive | 865915 - 866445 | 20414.3 |
| biodegradative arginine decarboxylase | SAMEA3472110_00804 | Not Available | Positive | 866477 - 868177 | 62945.4 |
| arac family transcriptional regulator | SAMEA3472110_00805 | Not Available | Positive | 868513 - 869274 | 29022.4 |
| arginine/agmatine antiporter | SAMEA3472110_00806 | Not Available | Positive | 869411 - 870748 | 46845.3 |
| cell division protein | SAMEA3472110_00807 | Not Available | Positive | 870852 - 872495 | 61555.4 |
| dna-binding transcriptional regulator basr | SAMEA3472110_00808 | Not Available | Positive | 872492 - 873160 | 25002.3 |
| proline/glycine betaine transporter | SAMEA3472110_00810 | Not Available | Negative | 874438 - 875940 | 54823.1 |
| mutational suppressor of yhjh motility mutation, function uncharacterised | SAMEA3472110_00811 | Not Available | Negative | 876204 - 877082 | 32951.7 |
| putative vimentin | SAMEA3472110_00812 | Not Available | Negative | 877079 - 879307 | 84288.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





