Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage-associated protein | SAMEA3472110_00773 | Not Available | Positive | 833711 - 834733 | 39981.9 |
| putative gtp-binding protein | SAMEA3472110_00774 | Not Available | Positive | 834817 - 835689 | 32464.8 |
| putative antigen 43 precursor (fluffing protein) | SAMEA3472110_00776 | Not Available | Positive | 836061 - 838907 | 97338.7 |
| putative plasmid-like protein | SAMEA3472110_00777 | Not Available | Positive | 838978 - 839211 | 8745.42 |
| transcriptional activator | SAMEA3472110_00786 | Not Available | Positive | 844503 - 846041 | 57818.1 |
| cadaverine/lysine antiporter | SAMEA3472110_00787 | Not Available | Positive | 846407 - 847741 | 46667.8 |
| lysine decarboxylase 1 | SAMEA3472110_00788 | Not Available | Positive | 847821 - 849968 | 81264.7 |
| putative oligopeptide transporter | SAMEA3472110_00789 | Not Available | Positive | 850027 - 851484 | 52955.7 |
| lysyl-trna synthetase | SAMEA3472110_00790 | Not Available | Positive | 851721 - 853238 | 57829.9 |
| putative inner membrane protein | SAMEA3472110_00791 | Not Available | Negative | 853357 - 853530 | 6555.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





