Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, is4 family, is10 | SAMEA3472110_00753 | Not Available | Positive | 811179 - 812066 | 33475.6 |
| chaperonin cpn60 | SAMEA3472110_00754 | Not Available | Negative | 812238 - 813884 | 57332.4 |
| 10 kda chaperonin (protein cpn10) (groes protein) | SAMEA3472110_00755 | Not Available | Negative | 813928 - 814221 | 10387.6 |
| inner membrane protein yjeh | SAMEA3472110_00756 | Not Available | Positive | 814497 - 815753 | 44828.2 |
| protein fxsa (suppressor of f exclusion of phage t7) | SAMEA3472110_00757 | Not Available | Negative | 815769 - 816245 | 17679.1 |
| aspartate ammonia-lyase | SAMEA3472110_00758 | Not Available | Positive | 816582 - 818018 | 52359.2 |
| anaerobic c4-dicarboxylate transporter | SAMEA3472110_00759 | Not Available | Positive | 818136 - 819437 | 45739.5 |
| divalent cation tolerance protein | SAMEA3472110_00760 | Not Available | Positive | 819553 - 819891 | 12307.7 |
| thiol:disulfide interchange protein | SAMEA3472110_00761 | Not Available | Positive | 819867 - 821564 | 61715.6 |
| putative transcriptional regulator | SAMEA3472110_00762 | Not Available | Positive | 821601 - 822176 | 21932.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





